Debian Patches

Status for biosquid/1.9g+cvs20050121-15.1

Patch Description Author Forwarded Bugs Origin Last update
afetch.man.patch Fix manpage for afetch no
alistat.man.patch Fix manpage for alistat no
compstruct.man.patch Fix manpage for compstruct no
Makefile.in.patch Make sure all tools will be really built no
seqstat.man.patch Fix manpage for seqstat no
sfetch.man.patch Fix manpage for sfetch no
shuffle.man.patch Fix manpage for shuffle no
sindex.man.patch Fix manpage for sindex no
sreformat.man.patch Fix manpage for sreformat no
getopt-segmentation-fault.patch Fix segmentation fault with ambiguous arguments The command line parser accessed invalid memory when a given
option matched several option definitions as a prefix, but none
of them exactly (e.g. "--s" as option with "--sam" and
"--samfrac" as option definitions). This was due to an incorrect
check of exact matching that tried to access "opt[i].name" with
i being greater than the upper bound of the array "opt" in case
of not having an exact match. Replaced it with the proper check.		 Martin Steghöfer <martin@steghoefer.eu> no debian
reproducible.patch make build reproducible This patch removes the CFLAGS from the testsuite Makefile.in, which contain
the build directory.		 Sascha Steinbiss <satta@debian.org> no
perl-testsuite-inc.patch add local directory to Perl lib search path '.' was removed from Perl's default @INC by https://bugs.debian.org/588017,
breaking the testsuite here. This patch reintroduces the current directory
explicitly.		 Sascha Steinbiss <satta@debian.org> no
automake.patch Use automake Andreas Tille <tille@debian.org> no 2020-08-12
pkg-config.patch Provide pkg-config input file Andreas Tille <tille@debian.org> no 2017-03-23

All known versions for source package 'biosquid'

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