Debian Patches
Status for ont-fast5-api/4.1.3+dfsg-6
| Patch | Description | Author | Forwarded | Bugs | Origin | Last update |
|---|---|---|---|---|---|---|
| fix_python_syntax.patch | Fix Python3 syntax | Andreas Tille <tille@debian.org> | no | 2021-05-23 | ||
| disable-tests-needing-root.patch | 4 tests need root access to execute. But enabling root just to pass 4 tests is not justified. | Nilesh Patra <nilesh@debian.org> | no | 2020-06-18 | ||
| progressbar.patch | Use package python3-progressbar instead of progressbar33 - latter is repleaceable | Nilesh Patra <nilesh@debian.org> | not-needed | 2021-05-26 | ||
| numpy2.patch | add patch for Numpy 2.x support | Alexandre Detiste <tchet@debian.org> | no | 2025-02-03 | ||
| drop_setuptools_runtime_dependency.patch | patch to avoid runtime dependency on python3-setuptools Not forwarded, upstream does not seem active. | Alexandre Detiste <alexandre.detiste@gmail.com> | no | 2026-01-14 | ||
| drop-pkg_resources.patch | remove pkg_resources. | Étienne Mollier <emollier@debian.org> | no | debian | 2026-03-06 | |
| hdf5-2.2-legacy-chunk.patch | Tolerate unreadable legacy chunk layout with HDF5 2.2.0 HDF5 2.2.0 tightened the validation of unfiltered chunk sizes as part of the fix for CVE-2025-44904. The rle_example.fast5 test file was written by an older HDF5 version and contains a partial chunk whose unfiltered size is smaller than the nominal chunk size. HDF5 1.14 reads it, but 2.2.0 rejects it with "chunk size is incorrect after being unfiltered". Skip the affected assertion in that case so the source package can build until the test file is regenerated or HDF5 restores compatibility. |
no | debian | 2026-10-20 |
All known versions for source package 'ont-fast5-api'
- 4.1.3+dfsg-6 (sid)
- 4.1.3+dfsg-1 (trixie)
- 4.1.1+dfsg-2 (bookworm)