| Patch | Description | Author | Forwarded | Bugs | Origin | Last update |
|---|---|---|---|---|---|---|
| hardening | accept the hardening flags | Michael R. Crusoe <michael.crusoe@gmail.com> | no | |||
| use_debian_packaged_samtools.patch | Use Debian packaged samtools | Andreas Tille <tille@debian.org> | no | 2016-12-09 | ||
| 2to3.patch | Use 2to3 to port to Python3 | Andreas Tille <tille@debian.org> | no | debian | 2019-09-12 | |
| stdgnu++11.patch | port codebase to gnu++11. Since boost 1.83, it is necessary to build rsem with C++ 2011 standard. This patch bumps the -std=gnu++98 passed by upstream Makefil to -std=gnu++11. It should become unnecessary once upstream bumped to C++ 2011 or later, or when the package will not depend on boost anymore, in case this is in upstream's agenda; there is a merge request open upstream to bump to -std=gnu++17 in the meantime. |
tienne Mollier <emollier@debian.org> | yes | debian upstream | 2023-12-18 |