Debian Patches
Status for sagemath/9.5-6
| Patch | Description | Author | Forwarded | Bugs | Origin | Last update |
|---|---|---|---|---|---|---|
| d0-cygdb3.patch | Find cygdb binary cygdb is called cygdb3 in Debian. | Tobias Hansen <thansen@debian.org> | no | |||
| d0-mathjax.patch | Change mathjax_path _static/mathjax are symlinks to /usr/share/javascript/mathjax created in debian/rules. | Tobias Hansen <thansen@debian.org> | not-needed | |||
| d0-rubiks.patch | Find rubiks binaries They have different names in Debian. | Tobias Hansen <thansen@debian.org> | no | |||
| d1-doc-docs.patch | no | |||||
| dt-ignore-deprecation-warnings.patch | ignore some deprecation warnings | Rogo <rogo95@proton.me> | no | |||
| dt-version-ipywidgets-6-revert-23177.patch | Upgrade to ipywidgets 7 | Jeroen Demeyer <jdemeyer@cage.ugent.be> | no | 2017-06-08 | ||
| dt-version-ipywidgets-6-revert-31517.patch | Sage output MathJax3 compatible htmls | Kwankyu Lee <ekwankyu@gmail.com> | no | 2021-04-09 | ||
| dt-version-ipywidgets-6-tests.patch | Adjust tests for ipywidgets 6 Adjust some more tests to the argument order used with ipywidgets 6. | Martin von Gagern <Martin.vGagern@gmx.net> | no | |||
| u0-32bit-integer-check.patch | [PATCH] Fix bug in conversion from python int to ZZ (python 3.11, 32 bit) This affects 32 bit architectures, where the representation of python integers changed in cpython 3.11, when compiled with gcc12. As part of #33842, the function `sage.arith.long.integer_check_long_py()` was rewritten to support the new representation. Unfortunately a bug remained that triggers UB for the conversion of integers between 2^60 and 2^63-1. Alas, the undesired behaviour does not happen with gcc10; it only started when I switched to gcc12. The bug manifests in lots of doctests failing, but a quick way to demonstrate the issue is sage: ZZ ( int(1152921504606847018) ) # 2^60 + 42 42 The function `integer_check_long_py()` has good unit testing, checking values around the word size, but this range was missing. This commit adds a simple fix and new test cases for a few integers in this range. Technical explanation: The UB is in the line cdef long lead_3_overflow = (<long>1) << (BITS_IN_LONG - 2 * PyLong_SHIFT) In our case we have `BITS_IN_LONG == 31` and `PyLong_SHIFT == 30` so the computed value is `<long>1 << -29` which is UB and it happens to evaluate to 0 with gcc10 but 8 with gcc12. The solution is to set the value to 0 when `BITS_IN_LONG < 2 * PyLong_SHIFT`. |
=?UTF-8?q?Gonzalo=20Tornar=C3=ADa?= <tornaria@cmat.edu.uy> | yes | upstream | 2023-01-04 | |
| u0-fix-arm64-libgap-segfaults.patch | Surround GAP_ValueGlobalVariable calls by GAP_Enter/GAP_Leave | Mauricio Collares <mauricio@collares.org> | yes | upstream | 2022-09-23 | |
| u0-version-arb-2.22.patch | Add abs tol to some arb tests | Antonio Rojas <arojas@archlinux.org> | yes | upstream | 2022-01-16 | |
| u0-version-gap-4.12.patch | Adapt to API changes in OpenOutputStream and CloseOutput | Antonio Rojas <arojas@archlinux.org> | yes | upstream | 2022-08-29 | |
| u0-version-linbox-1.7.patch | fix with LinBox new API | =?UTF-8?q?Cl=C3=A9ment=20Pernet?= <clement.pernet@gmail.com> | yes | upstream | 2021-12-07 | |
| u0-version-matplotlib-3.6.patch | [PATCH] Support matplotlib 3.6 | =?UTF-8?q?Gonzalo=20Tornar=C3=ADa?= <tornaria@cmat.edu.uy> | no | 2022-10-11 | ||
| u0-version-pari-2.15.patch | Adjust tests for pari 2.15 | Antonio Rojas <arojas@archlinux.org> | yes | upstream | 2022-09-20 | |
| u0-version-python-3.11.patch | Bump python_requires to >=3.8, <3.12 | Matthias Koeppe <mkoeppe@math.ucdavis.edu> | yes | upstream | 2022-08-08 | |
| u0-version-scipy-1.8.patch | [PATCH] Fix deprecation warning with scipy 1.8 | Antonio Rojas <arojas@archlinux.org> | no | 2022-02-13 | ||
| u0-version-singular-4.3.1-p3.patch | Apply https://github.com/archlinux/svntogit-community/blob/packages/sagemath/trunk/sagemath-singular-4.3.1.p3.patch | Matthias Koeppe <mkoeppe@math.ucdavis.edu> | yes | upstream | 2022-12-14 | |
| u0-version-sphinx-4.3.patch | Add a config value that is new in sphinx 4.3. | Tobias Hansen <thansen@debian.org> | yes | upstream | ||
| u0-version-sphinx-4.4.patch | Use roles when possible to fix warnings | Antonio Rojas <arojas@archlinux.org> | yes | upstream | 2022-02-01 | |
| u0-version-sphinx-5.2.patch | [PATCH] remove unused, and removed from sphinx 5, imported get_module_members | =?UTF-8?q?Fran=C3=A7ois=20Bissey?= <frp.bissey@gmail.com> | yes | upstream | 2022-07-11 | |
| u0-version-sympy-1.10.patch | [PATCH] sage.manifolds: Update doctests for SymPy 1.10 | Matthias Koeppe <mkoeppe@math.ucdavis.edu> | no | 2022-03-04 | ||
| u1-ipywidgets-repr.patch | Money-patch ipywidgets in the way that Sage upstream expects Sage upstream patches ipywidgets, but this is still being discussed upstream (see Bug below). In the meantime, we can have Sage monkey-patch ipywidgets at runtime, to prevent other users of ipywidgets being affected. |
Jeroen Demeyer <jdemeyer@cage.ugent.be> | yes | upstream | ||
| u2-fix-sympow-cachedir.patch | Set SYMPOW_CACHEDIR to be inside DOT_SAGE Otherwise tests fail in sbuild because sympow can't create HOME/.sympow | Ximin Luo <infinity0@debian.org> | invalid |
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