Debian Patches
Status for bcbio/1.2.9-4
| Patch | Description | Author | Forwarded | Bugs | Origin | Last update |
|---|---|---|---|---|---|---|
| cnvkitPath.patch | Deal with renamed cnvkit binary since we decided to diverge from Debian Policy in https://lists.debian.org/debian-med/2018/06/msg00043.html =================================================================== |
Steffen Moeller | no | 2020-11-14 | ||
| hts_nim_tools.patch | Use dash ('-') in file name of hts-nim-tools binary =================================================================== |
Steffen Moeller | no | 2020-11-13 | ||
| pytest2to3.patch | Use Python3 =================================================================== |
Steffen Moeller | no | 2020-11-13 | ||
| do_not_use_git.patch | Avoid calling Git - use Debian version to specify the code version | Andreas Tille <tille@debian.org> | no | debian | 2020-11-06 | |
| RscriptIsSystemVersion.patch | With Debian we want to use _our_ R installation, while with the typical conda-installation of bcbio this is the other way around. It is important not to mix these up, hence this strict return of the sytem version. This patch is not meant to be sent upstream. =================================================================== |
Steffen Moeller <moeller@debian.org> | no | |||
| remove_mock.patch | no | |||||
| fixeFreetypePreload.patch | The location of the freetype library on Debian is not where upstream expected it.=================================================================== | Steffen Moeller | no | |||
| pythonpaths.patch | Fix interpreter name to python3 =================================================================== |
Steffen Moeller | no | 2020-11-13 |