Debian Patches

Status for cctbx/2022.9+ds2+~3.11.2+ds1-6

Patch Description Author Forwarded Bugs Origin Last update
0015-dxtbx-adapte-the-boost_python-link-name.patch dxtbx adapte the boost_python link name =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-09-13
workaround_env_config.patch workaround_env_config Debian Science Maintainers no 2022-07-08
boost_adaptbx.patch boost_adaptbx use boost system libraries
Fix errors in picking up -lboost_python3* by using the
sysconfig.get_config_var multiarch support as SCons
drops the dpkg-architecture environment variables.
Debian Science Maintainers no 2022-07-08
reproducible-timestamp.patch [PATCH] boost_adaptbx/meta_ext.cpp: Remove embedded timestamp.
From e554ea5ffab260208f9ce81433005e612dc85bf5 Mon Sep 17 00:00:00 2001

https://reproducible-builds.org/docs/timestamps/
Vagrant Cascadian <vagrant@reproducible-builds.org> no 2022-02-22
libtbx_env-per-python-version.patch libtbx_env per python version =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-07-16
iotbx_with_system_libraries.patch iotbx with system libraries
- build extensions without the antlr3c sources files.
=?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-08-01
0007-iotbx-mtz-load-ccp4-data-from-the-right-directory.patch iotbx mtz load ccp4 data from the right directory =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-08-02
0009-scons-soname.patch scons soname =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-08-05
0010-fix-cbflib_adaptbx-compilation-with-the-system-cbfli.patch fix cbflib_adaptbx compilation with the system cbflib =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-08-09
0011-dxtbx-use-the-system-libraries.patch dxtbx use the system libraries =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-09-12
0012-dxtbx-remove-hdf5plugin.patch dxtbx remove hdf5plugin =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-09-13
0013-dxtbx-do-not-modify-the-HDF5_PLUGIN_PATH.patch dxtbx do not modify the HDF5_PLUGIN_PATH =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-09-13
0016-cctbx-avoid-FTBFS-when-cctbx-is-already-installed.patch cctbx avoid FTBFS when cctbx is already installed =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-09-19
0017-cctbx-do-not-hide-sign-comparison.patch cctbx do not hide sign comparison
This will help arch port
=?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= no 2022-09-21
0017-dxtbx-fix-for-unsigned-char-arch.patch dxtbx fix for unsigned char arch =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-09-21
0016-unactivated-ucif-compilation.patch unactivated ucif compilation =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-10-05
0017-smtbx-save-the-generated-test-file-under-tmp.patch smtbx save the generated test file under /tmp =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-10-06
0018-iotbx-link-with-ccp4c-instead-of-ccp4io.patch iotbx link with ccp4c instead of ccp4io =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-10-06
0019-cbflib_adapter-link-cbf-private-with-cbf.patch cbflib_adapter link cbf-private with cbf =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-10-11
0020-spotfinder-link-with-dxtbxspotfinder.patch spotfinder link with dxtbxspotfinder =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-10-11
0021-rstbx-link-with-ann_adaptor.patch rstbx link with ann_adaptor =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-10-11
0022-rstbx-link-rstbx_integration_ext-with-ann_adaptor.patch rstbx link rstbx_integration_ext with ann_adaptor =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-10-11
0023-rstbx-use-the-annself_excluded-namespace-from-ann-cc.patch rstbx use the annself_excluded namespace from ann-cctbx =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-10-14
0024-more-ann-ann-cctbx.patch more ann -> ann-cctbx =?utf-8?q?Picca_Fr=C3=A9d=C3=A9ric-Emmanuel?= <picca@debian.org> no 2022-10-14
0025-Stop-importing-pip-use-subprocesses-instead.-Fixes-7.patch Stop importing pip, use subprocesses instead. Fixes #710 (#797) Daniel Paley <dwpaley@lbl.gov> no debian upstream, https://github.com/cctbx/cctbx_project/commit/8a0b852fd10ed26f18613c9830538caaace5483f 2022-10-11
0026-Use-the-python3-binary.patch Use the python3 binary
On Debian there is no /usr/bin/python
Stefano Rivera <stefanor@debian.org> not-needed 2022-12-24
0027-cctbx-add-__getstate_manages_dict__-for-Python-3.11.patch cctbx: add __getstate_manages_dict__ for Python 3.11
- binner class defines __getstate__ and a non-empty __dict__
"Billy K. Poon" <bkpoon@lbl.gov> no upstream, https://github.com/cctbx/cctbx_project/commit/4ccdb45f1e0797e764c010261d39506c70a68568 2022-11-10
0028-libtbx-update-test-for-Python-3.11.patch libtbx: update test for Python 3.11 "Billy K. Poon" <bkpoon@lbl.gov> no upstream, https://github.com/cctbx/cctbx_project/commit/c1abc42da889e57665a40b81ad4f76778970a200 2022-11-10

All known versions for source package 'cctbx'

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