| Patch | Description | Author | Forwarded | Bugs | Origin | Last update |
|---|---|---|---|---|---|---|
| fix_imp_func_issue.patch | fix implicit declaration of function issue | BO YU <tsu.yubo@gmail.com> | yes | upstream | 2024-06-26 | |
| buildError.patch | Steffen Möller | no | 2018-05-23 | |||
| pythonpaths.patch | =================================================================== | Steffen Möller | no | 2018-05-23 | ||
| fix_libxml2_config.patch | Skip non-working check for libxml2 version which is granted by Build-Depends anyway | Andreas Tille <tille@debian.org> | no | 2018-12-06 | ||
| 2to3.patch | Use 2to3 to port to Python3 | Andreas Tille <tille@debian.org> | no | debian | 2019-09-11 | |
| python3_build_system.patch | Make sure Python3 is used | Andreas Tille <tille@debian.org> | no | debian | 2019-09-11 | |
| lapacke.patch | Use LAPACKE instead of ATLAS Sébastien Villemot <sebastien@debian.org> | Andreas Tille <tille@debian.org> | no | debian | 2024-01-15 | |
| python3_syntax.patch | Fix: SyntaxWarning: "is" with a literal. Did you mean "=="? | Andreas Tille <tille@debian.org> | no | 2024-01-11 | ||
| fix-test-mcmc.patch | no | |||||
| python3.12.patch | no | |||||
| gcc-14.patch | fix pointer indirection level in tests/mcmc.c. Attempts to build ghmm with gcc 14 end up with the following error: . mcmc.c: In function ‘main’: mcmc.c:148:15: error: initialization of ‘int *’ from incompatible pointer type ‘int **’ [-Wincompatible-pointer-types] 148 | int * Q = ghmm_dmodel_cfbgibbs(mo, my_output, | ^~~~~~~~~~~~~~~~~~~~ mcmc.c:150:108: error: passing argument 4 of ‘ghmm_dmodel_viterbi_logp’ makes pointer from integer without a cast [-Wint-conversion] 150 | printf("viterbi prob mcmc%f \n", ghmm_dmodel_viterbi_logp(mo, my_output->seq[0], my_output->seq_len[0], Q[0])); | ~^~~ | | | int . This looks to be caused by a missing '*' in Q declaration. |
Étienne Mollier <emollier@debian.org> | no | debian | 2024-07-16 | |
| python3.12-syntax.patch | Fix Python3.12 string syntax | Andreas Tille <tille@debian.org> | no | debian | 2024-06-07 | |
| python3.13-build-fix.patch | Replace PyEval_CallObject with PyObject_CallObject deprecated in Python 3.9 and removed in Python 3.13 | Nilesh Patra <nilesh@debian.org> | no | 2025-01-14 |