Debian Patches

Status for ghmm/0.9~rc3-9

Patch Description Author Forwarded Bugs Origin Last update
fix_imp_func_issue.patch fix implicit declaration of function issue BO YU <tsu.yubo@gmail.com> yes upstream 2024-06-26
buildError.patch Steffen Möller no 2018-05-23
pythonpaths.patch =================================================================== Steffen Möller no 2018-05-23
fix_libxml2_config.patch Skip non-working check for libxml2 version which is granted by Build-Depends anyway Andreas Tille <tille@debian.org> no 2018-12-06
2to3.patch Use 2to3 to port to Python3 Andreas Tille <tille@debian.org> no debian 2019-09-11
python3_build_system.patch Make sure Python3 is used Andreas Tille <tille@debian.org> no debian 2019-09-11
lapacke.patch Use LAPACKE instead of ATLAS Sébastien Villemot <sebastien@debian.org> Andreas Tille <tille@debian.org> no debian 2024-01-15
python3_syntax.patch Fix: SyntaxWarning: "is" with a literal. Did you mean "=="? Andreas Tille <tille@debian.org> no 2024-01-11
fix-test-mcmc.patch no
python3.12.patch no
gcc-14.patch fix pointer indirection level in tests/mcmc.c. Attempts to build ghmm with gcc 14 end up with the following error:
.
mcmc.c: In function ‘main’:
mcmc.c:148:15: error: initialization of ‘int *’ from incompatible pointer type ‘int **’ [-Wincompatible-pointer-types]
148 | int * Q = ghmm_dmodel_cfbgibbs(mo, my_output,
| ^~~~~~~~~~~~~~~~~~~~
mcmc.c:150:108: error: passing argument 4 of ‘ghmm_dmodel_viterbi_logp’ makes pointer from integer without a cast [-Wint-conversion]
150 | printf("viterbi prob mcmc%f \n", ghmm_dmodel_viterbi_logp(mo, my_output->seq[0], my_output->seq_len[0], Q[0]));
| ~^~~
| |
| int
.
This looks to be caused by a missing '*' in Q declaration.
Étienne Mollier <emollier@debian.org> no debian 2024-07-16

All known versions for source package 'ghmm'

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