Debian Patches

Status for libvcflib/1.0.12+dfsg-1

Patch	Description	Author	Forwarded	Bugs	Last update
no_fsom	fsom is not used	Michael R. Crusoe <crusoe@debian.org>	not-needed
use_debian_packaged_smithwaterman.patch	Use Debian packaged libsmithwaterman	Andreas Tille <tille@debian.org>	not-needed		2021-01-28
use_debian_packaged_fastahack.patch	Use Debian packaged libfastahack (and libdisorder)	Andreas Tille <tille@debian.org>	not-needed		2021-01-28
use_debian_packaged_libssw.patch	Use Debian packaged libssw (while its not clear why two implementations of Smith-Waterman are needed at all)	Andreas Tille <tille@debian.org>	not-needed	debian	2021-01-28
shared_lib.patch	Create shared lib instead of static	Andreas Tille <tille@debian.org>	not-needed		2016-09-15
pkg-config.patch	Add pkg-config file to simplify building of freebayes	Andreas Tille <tille@debian.org>	not-needed		2017-02-10
tabix_linking	link against tabixpp	Michael R. Crusoe <crusoe@debian.org>	not-needed
wfa2_linking	set -lwfa2 for the linker This works around a failure to catch the wfa2 library by the CMake files.	Étienne Mollier <emollier@debian.org>	no		2023-02-11
cmakelists-fixups.patch	fix a couple of issues caught while working on 1.0.11~pre2. There is one case of install() statement having something unexpected in its target, and removing the entry does not seem to cause anything obvious to be lost. The other issue resolved is the proper capture of the tabix header in /usr/include, which has a slightly different name from the embedded copy.	Étienne Mollier <emollier@debian.org>	no		2024-05-04