Debian Patches
Status for prime-phylo/1.0.11-13
| Patch | Description | Author | Forwarded | Bugs | Origin | Last update |
|---|---|---|---|---|---|---|
| fix-ftbfs-with-Boost160.patch | Fix FTBFS with Boost 1.60 Add serialization/utility include to prevent error: src/cxx/libraries/prime/MpiMCMC.cc:112:33: required from here /usr/include/boost/serialization/access.hpp:116:9: error: ‘struct std::pair<int, int>’ has no member named ‘serialize’ t.serialize(ar, file_version); |
Graham Inggs <ginggs@debian.org> | no | debian | 2016-08-03 | |
| fix-gcc-8.patch | 'beep::' is redundant inside 'namespace beep' block Fixes FTBFS with GCC 8: PrimeOptionMap.hh:162:33: error: 'std::ostream& beep::operator<<(std::ostream&, const beep::PrimeOptionMap&)' should have been declared inside 'beep' |
Juhani Numminen <juhaninumminen0@gmail.com> | no | debian | 2018-05-22 | |
| 0003-Fix-build-with-Boost-1.67.patch | Fix build with Boost 1.67. Explicitly including the header boost/serialization/vector.hpp is required for automatic serialization of std::vector. |
Giovanni Mascellani <gio@debian.org> | no | debian | 2018-11-03 | |
| 0004-fix-gcc10-build.patch | Append extern to prevent gcc-10 FTBFS | Nilesh Patra <npatra974@gmail.com> | no | debian | ||
| fix-ftbfs-with-gcc13.patch | Fix missing headers and missing prototypes=================================================================== | Zixing Liu <zixing.liu@canonical.com> | no | debian | 2024-04-11 | |
| gcc-14.patch | fix file closure. The initial code attempts to close a FILE pointer using close(2) which is the bare system call expecting a file descriptor. The correct function to call on such variable would be glibc's fclose(3). This was caught by the gcc bump to version 14. |
Étienne Mollier <emollier@debian.org> | no | debian | 2024-08-07 | |
| typos.patch | fix multiple typos caught by lintian. | Étienne Mollier <emollier@debian.org> | no | 2024-08-07 | ||
| openmpi5.patch | remove inclusion of mpicxx.h. The header is not provided by openmpi 5 anymore, resulting in several instances of: . /<<PKGBUILDDIR>>/src/cxx/libraries/prime/MpiMCMC.cc:11:10: fatal error: mpicxx.h: No such file or directory 11 | #include "mpicxx.h" | ^~~~~~~~~~ . It seems that plain drop of the header file is sufficient to put the build back on tracks. |
Étienne Mollier <emollier@debian.org> | no | debian | 2024-11-03 |