| Patch | Description | Author | Forwarded | Bugs | Origin | Last update |
|---|---|---|---|---|---|---|
| mathjax-path | Set mathjax path to debian's copy | Kevin Murray <spam@kdmurray.id.au> | not-needed | 2015-11-30 | ||
| 0002-use-libsww-as-library-not-embedded-src.patch | use libsww as library, not embedded src | Kevin Murray <spam@kdmurray.id.au> | not-needed | 2016-11-15 | ||
| no_privacy_breach_logo.patch | Remove privacy breaching logo | Andreas Tille <tille@debian.org> | not-needed | 2017-10-06 | ||
| simde | add SIMD everywhere for non x86 support | Michael R. Crusoe <crusoe@debian.org> | yes | |||
| soften_test | 2.220446049250313e-16 is basically zero | Michael R. Crusoe <crusoe@debian.org> | yes | |||
| pandas1.1-ordination-fix.patch | Ordination fix (#1720) * `skbio.stats.ordination` tests have been relaxed. * Fixes build errors for newer versions of NumPy, Pandas, and SciPy. * Corrected a criticial bug in `skbio.alignment.StripedSmithWaterman` / `skbio.alignment.local_pairwise_align_ssw` which would cause the formatting of the aligned sequences to misplace gap characters by the number of gap characters present in the opposing aligned sequence up to that point. This was caused by a faulty implementation of CIGAR string parsing, see [#1679](https://github.com/biocore/scikit-bio/pull/1679) for full details. |
Jamie Morton <jamietmorton@gmail.com> | no | upstream, https://github.com/biocore/scikit-bio/pull/1720 | 2020-08-26 | |
| pandas1.1-valueerror.patch | Update ValueError message assertion check Fixes compatibility with Pandas 1.1. |
Ritik Raina <rraina@ucsd.edu> | no | debian | https://github.com/biocore/scikit-bio/pull/1719 | 2020-10-20 |
| local_inventory | Use Debian packages for intersphinx-links | Michael R. Crusoe <crusoe@debian.org> | not-needed |