Debian Patches

Status for skimage/0.19.3-8

Patch Description Author Forwarded Bugs Origin Last update
fix-documentation-links.patch fix documentation links
change to absolute filesystem links
Andreas Tille <tille@debian.org> no 2017-08-17
Avoid-privacy-breach.patch Avoid privacy breach
use standard fonts instead of loading something from google
use local jquery from sphinx
Ole Streicher <olebole@debian.org> no 2016-12-24
Skip-failing-test-on-big-endian-architectures.patch Skip failing test on big endian architectures Andreas Tille <tille@debian.org> no 2017-08-17
Don-t-download-intersphinx-mapping.patch Don't download intersphinx mapping Yangfl <mmyangfl@gmail.com> no 2018-10-17
Disable-test-that-requires-local-server.patch Disable test that requires local server
While the required package (python3-pytest-localserver) is available
on Debian, this test fails during the startup of the localserver:

```
skimage/io/_io.py:47: in imread
with file_or_url_context(fname) as fname:
/usr/lib/python3.8/contextlib.py:113: in __enter__
return next(self.gen)
skimage/io/util.py:28: in file_or_url_context
u = urllib.request.urlopen(resource_name)
/usr/lib/python3.8/urllib/request.py:222: in urlopen
return opener.open(url, data, timeout)
/usr/lib/python3.8/urllib/request.py:525: in open
response = self._open(req, data)
/usr/lib/python3.8/urllib/request.py:542: in _open
result = self._call_chain(self.handle_open, protocol, protocol +
/usr/lib/python3.8/urllib/request.py:502: in _call_chain
result = func(*args)
/usr/lib/python3.8/urllib/request.py:1348: in http_open
return self.do_open(http.client.HTTPConnection, req)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _

self = <urllib.request.HTTPHandler object at 0x7fabb4e020a0>
http_class = <class 'http.client.HTTPConnection'>
req = <urllib.request.Request object at 0x7fabb463b0d0>, http_conn_args = {}
host = '127.0.0.1:9', h = <http.client.HTTPConnection object at 0x7fabb463b2b0>

def do_open(self, http_class, req, **http_conn_args):
[...]
try:
try:
h.request(req.get_method(), req.selector, req.data, headers,
encode_chunked=req.has_header('Transfer-encoding'))
except OSError as err: # timeout error
> raise URLError(err)
E urllib.error.URLError: <urlopen error [Errno 111] Connection refused>
```
Ole Streicher <olebole@debian.org> no 2019-12-18
Don-t-include-links-to-other-versions.patch Don't include links to other versions
See https://github.com/scikit-image/scikit-image/issues/4603
Ole Streicher <olebole@debian.org> no 2020-04-21
Disable-binder-reference.patch Disable binder reference Ole Streicher <olebole@debian.org> no 2020-06-25
Include-everyting-from-the-data-subdir.patch Include everyting from the data subdir Ole Streicher <olebole@debian.org> no 2020-06-29
Skip-tests-that-need-the-python3-pooch-package-and-intern.patch Skip tests that need the python3-pooch package and internet connection

python3-pooch is not available yet (RFS #968470)
Ole Streicher <olebole@debian.org> no 2020-12-16
Replace-myst-parser-by-recommonmark.patch Replace myst-parser by recommonmark
myst-parser is not available in Debian
Ole Streicher <olebole@debian.org> no 2020-12-16
update-plot_euler_number.py-for-maplotlib-3.6-compatibili.patch update plot_euler_number.py for maplotlib 3.6 compatibility
passing kwargs to fig.gca() is no longer supported
Gregory Lee <grlee77@gmail.com> no 2022-09-16
Pragmatically-mark-tests-xfail-that-fail-on-mipsel.patch Pragmatically mark tests xfail that fail on mipsel Ole Streicher <olebole@debian.org> no 2023-01-04
numpy_1.24.patch [PATCH] Handle new warnings introduced in NumPy 1.24 (#6637)
* ignore warning about deprecated int0 arising from SciPy<1.9.4 in one test case

This warning appears with NumPy>=1.24 where np.int0 has been deprecated

* ignore warning about deprecated np.bool8 in dtype utilities

This warning appears with NumPy>=1.24 where np.bool8 has been deprecated

* bump tolerance of float64 case in test_ciede2000_dE

uncertain why this was needed for NumPy>=1.24

* refactor relabel_sequential to avoid a new NumPy RuntimeWarning

* use explicit astype call to avoid a DeprecationWarning in Cascade

* Apply suggestions from code review
Gregory Lee <grlee77@gmail.com> no 2022-11-29
numpy_1.24_additional.patch Fix remaining Numpy 1.24 issue that was not yet covered by upstream patch Andreas Tille <tille@debian.org> no 2023-01-12
Remove-reference-to-example-that-required-dask.patch Remove reference to example that required dask Ole Streicher <olebole@debian.org> no 2023-01-15
Disable-test_lab_lch_roundtrip_dtypes.patch Disable test_lab_lch_roundtrip_dtypes
fails on s390x
https://github.com/scikit-image/scikit-image/issues/6670
Ole Streicher <olebole@debian.org> no 2023-01-17

All known versions for source package 'skimage'

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