| Patch | Description | Author | Forwarded | Bugs | Origin | Last update |
|---|---|---|---|---|---|---|
| RisR.patch | Alter script interpreter | Steffen Moeller <moeller@debian.org> | no | 2023-08-29 | ||
| script-exe-paths | Fix script exe_paths denovo_map.pl and other stacks scripts hard-code the binary paths to the installation directory. However, we move these binaries to /usr/lib/stacks/bin, which breaks these scripts. This hard-codes the binary path to the correct location. |
Kevin Murray <spam@kdmurray.id.au> | no | 2016-10-21 | ||
| use_debian_packaged_htslib.patch | Use Debian packaged version of htslib | Andreas Tille <tille@debian.org> | no | 2018-02-18 | ||
| fix_spelling_errors.patch | Fix spelling errors in various generated binaries | Lance Lin <lq27267@gmail.com> | no | 2023-08-29 | ||
| change_program_exit_to_success.patch | Fix exit codes to be successful and output to stdout. | Lance Lin <lq27267@gmail.com> | no | 2024-01-19 | ||
| offer_help_option_for_stacks_gdb.patch | Offer help option | Lance Lin <lq27267@gmail.com> | no | 2023-09-06 |