| Patch | Description | Author | Forwarded | Bugs | Origin | Last update |
|---|---|---|---|---|---|---|
| ec2_error.patch | commit 9524076964fa3ccb63dc54f83a9dd9d51984eb5c AWS: better handle errors getting EC2 identity. diff --git a/src/toil/lib/aws/__init__.py b/src/toil/lib/aws/__init__.py index 03c45848..3b1d493d 100644 |
Michael R. Crusoe <michael.crusoe@gmail.com> | yes | 2023-02-06 | ||
| exit_code_exception | Fix exception checking for exit_code Otherwise an AttributeError is raised instead of the correct exception |
Michael R. Crusoe <crusoe@debian.org> | yes | |||
| setting_version.patch | Fixing version.py that is variable and required Generated by running `python version_template.py` from a git checkout of the source to the tag corresponding to the release As of Toil 5.7.0 the `cwltool_version` field is set in requirements-cwl.txt, please copy/update that field manually |
Steffen Moeller <moeller@debian.org> | not-needed | debian | 2020-05-07 | |
| no_galaxy_lib | skip galaxy-lib, not yet packaged for Debian | Michael R. Crusoe <crusoe@debian.org> | not-needed | |||
| debianize_docs | Update docs to reflect a local install | Michael R. Crusoe <crusoe@debian.org> | not-needed | |||
| soften-mesos-deps | Skip addict | Michael R. Crusoe <crusoe@debian.org> | not-needed | |||
| soften-pydocker-dep | Allow for use of python3-docker package | Michael R. Crusoe <crusoe@debian.org> | not-needed | |||
| ship_tests | ship all of the tests and supporting data | Michael R. Crusoe <crusoe@debian.org> | yes | |||
| skip_py_tes_dep | Skip the py-tes dependency It is not yet available in Debian |
Michael R. Crusoe <crusoe@debian.org> | not-needed | |||
| atomic_copy_as_alternative.patch | os.link does not work with debci based setup and hence default to atomic copy when it does not work as intended | Nilesh Patra <nilesh@debian.org> | no | 2022-03-10 | ||
| python3_in_doc.patch | Make sure the doc applies to Debian installations with Python3 | Andreas Tille <tille@debian.org> | no | 2022-06-23 | ||
| avoid_boto | avoid an unnecessary mypy_boto3_s3 import | Michael R. Crusoe <crusoe@debian.org> | no | |||
| fewer_cores | Tests: only request a single core | Michael R. Crusoe <crusoe@debian.org> | no |