| Patch | Description | Author | Forwarded | Bugs | Origin | Last update |
|---|---|---|---|---|---|---|
| 01_welcome-csh.patch | Avoid dependency from csh | Philipp Benner <mail@philipp-benner.de> | not-needed | |||
| 02_isnumber.patch | Replace isnumber() (which does not exist on linux) by isdigit(). | Philipp Benner <mail@philipp-benner.de> | not-needed | |||
| 03_doc-nodycache.patch | Documentation bugfix. | not-needed | ||||
| 04_wise2-pdflatex-update.patch | Make wise2.tex pdflatex compatible. | not-needed | ||||
| 05_glib2.patch | To build wise2 with the Glib version 2.0 instead of 1.2. | Barry deFreese <bdefreese@debian.org> | invalid | |||
| 06_getline.patch | Fixed conflicting definitions of getline(). | Philipp Benner <philipp@debian.org> | not-needed | debian | 2009-10-31 | |
| 07_ld--as-needed.patch | Fix FTBFS with ld --as-needed. | not-needed | ||||
| 08_mayhem.patch | Fix run time errors detected by Mayhem | Philipp Benner <philipp@debian.org> | not-needed | 2013-07-07 | ||
| 09_dnal-add-return-statement.patch | Make sure dnal has a valid return value This affects a bug reported against python-biopython. | Dejan Latinovic <Dejan.Latinovic@imgtec.com> | not-needed | debian | 2014-08-04 | |
| 10_fix_path_to_data_files.patch | Brute force patch to fix the PATH to the data files to make the tools finding the needed data for the test suite . In principle the PATH should be configurable and the test suite script even contains a parameter (-cf) for this - but this seems to be ignored. . The correct way to deal with this would be a configuration option but I had no intend to spend to much time into some software that was declared to be orphaned (superseded by exonerate). So this primitive patch works to run the test suite successfully (which is not the case without the patch). |
Andreas Tille <tille@debian.org> | not-needed | 2014-08-04 | ||
| 11_consistent_manual_dates.patch | Use fixed dates for manuals. These make the build reproducible. I have picked the file modificatin dates of the corresponding source .tex files. |
Sascha Steinbiss <sascha@steinbiss.name> | not-needed | |||
| spelling.patch | Fix spelling issues | Andreas Tille <tille@debian.org> | not-needed | 2017-09-22 | ||
| cross.patch | Do not hard code the build architecture pkg-config | Helmut Grohne <helmut@subdivi.de> | not-needed | debian | 2020-04-18 | |
| implicit-function-declaration.patch | Fix implicit-function-declaration build errors | Lance Lin <lq27267@gmail.com> | not-needed | 2024-03-14 | ||
| executable-is-script.patch | Fix perl binary location for executable-not-elf-or-script lintian warning | Lance Lin <lq27267@gmail.com> | not-needed | 2024-03-15 | ||
| gcc-14.patch | fix multiple issues gone fatal with gcc 14. | Étienne Mollier <emollier@debian.org> | no | debian | 2024-08-15 |